Genome-browser demonstrations to revisit

saving the JBrowse demos, especially the synchronized views. how does a selected sequence / column / node keep its identity across panes? also maybe a back button for selections would be useful, not just more settings.

• july 7 references: genome-browser hubs, AlphaGenome browser demo, and MSA-family browser. The lab log records a presentation about AlphaGenome and its use in JBrowse.

• reference use: inspect how a browser keeps track of the selected region, displayed evidence and multiple synchronized views. For the alignment/tree project, the useful question is how a selected sequence, alignment column or tree node maps between views without losing identity.

• review questions: which data are fetched on demand, which are computed, and which annotations indicate a model prediction rather than an observation? How is confidence distinguished from color used only for categorical identity?

• These are demonstration links preserved from the meeting log. Their current runtime behavior was not tested for this notebook rewrite, and the log does not show that their components were integrated into EvolDeeds on this date.